You are here

Publications

Found 25 results
Author [ Type(Desc)] Year
Filters: First Letter Of Last Name is A  [Clear All Filters]
Journal Article
Wilkin J, Rosenfeld L, Allen A, Baltes R, Baptista A, He R, Hogan P, Kurapov A, Mehra A, Quintrell J et al..  2017.  Advancing coastal ocean modelling, analysis, and prediction for the US Integrated Ocean Observing System. Journal of Operational Oceanography. :1-12.
Anderson CR, Davis RE, Bandolin NS, Baptista AM, Tebo BM.  2011.  Analysis of in situ manganese(II) oxidation in the Columbia River and offshore plume: linking Aurantimonas and the associated microbial community to an active biogeochemical cycle. Environmental Microbiology.
Crump BC, Peterson BJ, Raymond PA, Amon RMW, Rinehart A, McClelland JW, Holmes RM.  2009.  Circumpolar synchrony in big river bacterioplankton. Proceedings of the National Academy of Sciences. 106(50):21208-21212.
Nechad B., Ruddick K., Schroeder T., Oubelkhier K., Blondeau-Patisseri D., Cherukuru N., Brando V., Dekker A., Clementson L., Banks A.C. et al..  2015.  CoastColour Round Robin data sets: A database to evaluate the performance of algorithms for the retrieval of water quality parameters in coastal waters. Earth System Science Data. 7(2):319-348.
Smith MW, Zeigler_Allen L, Allen A, Herfort L, Simon HM.  2013.  Contrasting Genomic Properties of Free-living and Particle-attached Microbial Assemblages within a Coastal Ecosystem. Frontiers in Microbiology.
Azevedo A., Oliveira A, Fortunato AB, Zhang Y, Baptista AM.  2014.  A cross-scale numerical modeling system for management support of oil spill accidents. Marine Pollution Bulletin. 80(1-2):132-147.
Bräuer SL, Adams C, Kranzler K, Murphy D, Xu M, Zuber P, Simon HM, Baptista AM, Tebo BM.  2011.  Culturable Rhodobacter and Shewanella species are abundant in estuarine turbidity maxima of the Columbia River. Environmental Microbiology . 13(3)
Moran M.A., Kujawinski E.B., Stubbins A., Fatland R., Aluwihare L.I., Buchan A., Crump B.C., Dorrestein P.C., Dyhrman S.T., Hess N.J. et al..  2016.  Deciphering ocean carbon in a changing world. Proceedings of the National Academy of Sciences of the United States of America. 113(12):3143-3151.
Ahn S, Peterson TD, Righter J, Miles DM, Tratnyek PG.  2013.  Disinfection of Ballast Water with Iron Activated Persulfate. Environmental Science & Technology. 47(20)
Hamilton M, Hennon GMM, Morales R, Needoba JA, Peterson TD, Schatz M, Swalwell J, E. Armbrust V, Ribalet F.  2017.  Dynamics of Teleaulax-like cryptophytes during the decline of a red water bloom in the Columbia River Estuary. J Plankton Res. :1-11.
Burke BJ, Anderson JJ, Baptista AM.  2014.  Evidence for multiple navigational sensory capabilities by Chinook salmon. Aquatic Biology.
Bruland KW, Lohan MC, Aguilar-Islas AM, Smith GJ, Sohst B, Baptista AM.  2008.  Factors influencing the chemistry of the near-field Columbia River plume: Nitrate, silicic acid, dissolved Fe, and dissolved Mn. Journal of Geophysical Research. 113
Anthony S, Prahl FG, Peterson TD.  2012.  Methane dynamics in the Willamette River, Oregon, U.S.A.. Limnology and Oceanography. 57(5)
White AE, Foster RA, Benitez-Nelson CR, Masqué P, Verdeny E, Popp BN, Arthur KE, Prahl FG.  2012.  Nitrogen fixation in the Gulf of California and the Eastern Tropical North Pacific. Progress in Oceanography.
Davidson S, Cohen-Boulakia S, Eyal A, Ludäscher B, McPhillips T, Bowers S, Anand M K, Freire J.  2007.  Provenance in Scientific Workflow Systems. IEEE Data Engineering Bulletin.
Durkin CA, Bender SJ, Chan KYK, Gaessner K, Grunbaum D, Armburst EV.  2013.  Silicic acid supplied to coastal diatom communities influences cellular silicification and the potential export of carbon. Limnology and Oceanography. :1707-1726.
Garcia-Mendoza E, Rivas D, Olivosortiz A, Almazanbecerril A, Castanedavega C, Penamanjarrez J.  2009.  A toxic Pseudo-nitzschia bloom in Todos Santos Bay, northwestern Baja California, Mexico. Harmful Algae. 8(3):493-503.
Anderson EW, Potter KC, Matzen LE, Shepherd JF, Preston GA, Silva CT.  2011.  A User Study of Visualization Effectiveness Using EEG and Cognitive Load. Computer Graphics Forum. 30(3):791-800.
Silva CT, Anderson EW, Santos E, Freire J.  2011.  Using VisTrails and Provenance for Teaching Scientific Visualization. Computer Graphics Forum. 30(1):75-84.
Santos E, Lins L, Ahrens J, Freire J, Silva CT.  2009.  VisMashup: Streamlining the Creation of Custom Visualization Applications. IEEE Transactions on Visualization and Computer Graphics. 15(6):1539-1546.
Peer-reviewed Conference Paper
Howe B, Lawson P, Bellinger R, Anderson EW, Santos E, Freire J, Scheidegger C, Baptista AM, Silva CT.  2008.  End-to-End eScience: Integrating Workflow, Query, Visualization, and Provenance at an Ocean Observatory. 2008 IEEE Fourth International Conference on eScience (eScience). :127-134.
Daniels J, Anderson EW, Nonato LG, Silva CT.  2010.  Interactive Vector Field Feature Identification. IEEE Transactions on Visualization and Computer Graphics (Proceedings of IEEE Visualization 2010).