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Palacios SL, Peterson TD, Kudela RM.  2009.  Development of synthetic salinity from remote sensing for the Columbia River plume. Journal of Geophysical Research. 114
Palacios SL, Peterson TD, Kudela RM.  2012.  Optical characterization of water masses within the Columbia River Plume. Journal of Geophysical Research. 117(11)
Peterson TD, Golda RL, Garcia ML, Li B, Maier MA, Needoba JA, Zuber P.  2013.  Associations between Mesodinium rubrum and cryptophyte algae in the Columbia River estuary. Aquatic Microbial Ecology. 68(2)
Peterson TD, Harrison PJ.  2012.  Diatom dynamics in a long-lived mesoscale eddy in the northeast subarctic Pacific Ocean. Deep Sea Research Part I: Oceanographic Research Papers.
Peterson TD, Crawford DW, Harrison PJ.  2011.  Mixing and biological production at eddy margins in the eastern Gulf of Alaska. Deep Sea Research Part I: Oceanographic Research Papers. 58
Peterson TD, Crawford DW, Harrison PJ.  2011.  Evolution of the phytoplankton assemblage in a long-lived mesoscale eddy in the eastern Gulf of Alaska. Marine Ecology Progress Series. 424:53-73.
Petes LE, Menge BA, Chan F, Webb MAH.  2008.  Gonadal tissue color is not a reliable indicator of sex in rocky intertidal mussels. Aquatic Biology. 3:63-70.
Pfeiffer-Herbert AS, Prahl FG, Hales B, Lerczak JA, Pierce SD, Levine MD.  2015.  High resolution sampling of methane transport in the Columbia River near-field plume: implications for sources and sinks in a river-dominated estuary. Limnology & Oceanography.
Plant JN, Johnson KS, Needoba JA, Coletti LJ.  2009.  NH4-Digiscan: an in situ and laboratory ammonium analyzer for estuarine, coastal and shelf waters. Limnology and Oceanography.
Priest GR, Goldfinger C, Wang K, Witter RC, Zhang Y, Baptista AM.  2009.  Confidence levels for tsunami-inundation limits in northern Oregon inferred from a 10,000-year history of great earthquakes at the Cascadia subduction zone. Natural Hazards. 54(1):27-73.