09 / 11
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09 / 12
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09 / 13
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09 / 14
Start: 10:30
End: 12:00
CMOP will have a cruise planning meeting/videoconference on Friday, September 14 at 10:30 am - 12:00 pm (PST) for the upcoming cruise in November. The agenda is as follows:
Presentation and discussion of straw cruise plan (River, Estuary, plume, Oregon and Washington coasts)
Chief scientist during ERF conference (3 Nov (evening) – 10 Nov)
o Mooring work
o ETM sampling: practical issues for sampling
o Involvement of Forerunner?
o List of participants
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09 / 15
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09 / 16
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09 / 17
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09 / 18
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09 / 19
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09 / 20
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09 / 21
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09 / 22
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09 / 23
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09 / 24
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09 / 25
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09 / 26
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09 / 27
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09 / 28
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09 / 29
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09 / 30
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10 / 1
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10 / 2
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10 / 3
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10 / 4
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10 / 5
Start: 11:00
End: 12:00
Friday, October 5, 2007
11:00 a.m.
OGI School of Science & Engineering, Paul Clayton Buidlding, Room 401
Speaker: Mariya Smit, Dept. of Microbiology, University of Washington
Host: Holly Simon
Title: CombiMatrix Oligonucleotide Arrays: Genotyping and Gene
Expression Assays Employing Electrochemical Detection
Seminar web page: www.ogi.edu/event/404
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10 / 6
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10 / 7
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10 / 8
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10 / 9
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10 / 10
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10 / 11
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10 / 12
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10 / 13
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10 / 14
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10 / 15
Start: 15:00
End: 16:00
On Monday, October 15th, at 3PM, in the second floor lounge of the Cooley Science Center, CMOP will host a welcome reception for Dr. Joseph Needoba who has accepted a faculty appointment to the EBS department. Coffee and cookies will be served, and all are welcome!
Dr. Needoba received his B.Sc. in Oceanography and Biology (with honors) from the University of British Columbia, and his Ph.D. in Botany, also from UBC. He has been at the Monterey Bay Aquarium Research Institute (MBARI) since 2003. We welcome Dr. Needoba to Oregon, to OHSU, to OGI, to the EBS department, and to CMOP.
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10 / 16
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10 / 17
Start: 14:00
End: 16:00
The first of a monthly series of meetings for setting and implementing a research and operations agenda for Cyberinfrastructure at CMOP.
Attendees: David Maier (PSU), Claudio Silva (Utah), Nirupama Bulusu (PSU), Wu-chi Feng (PSU), Bill Howe (CMOP), Antonio Baptista (CMOP).
Meeting minutes (Must be logged in to view.)
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10 / 18
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10 / 19
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10 / 20
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10 / 21
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10 / 22
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10 / 23
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10 / 24
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10 / 25
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10 / 26
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10 / 27
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10 / 28
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10 / 29
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10 / 30
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10 / 31
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11 / 1
Start: 12:00
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 2
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 3
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 4
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 5
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 6
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 7
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 8
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
Start: 15:00
End: 16:00
Ibrahim Hoteit
Assistant Scientist
Scripps Institution of Oceanography
Paul Clayton Building - Room 401
OGI School of Science & Engineering
Oregon Health & Science University
Nov 8, 2007 at 3:00 PM
Title:
Examples of Four-Dimensional Data Assimilation in Oceanography
Abstract
The talk will discuss the theoretical and practical developments of several four dimensional ocean data assimilation systems. Starting with a brief overview on data assimilation approaches, the talk is divided into two parts. In the first part, I will discuss the development of eddy-permitting 4DVAR assimilation systems based on the MITGCM model and its adjoint.
|
11 / 9
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 10
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 11
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 12
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 13
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 14
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 15
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 16
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 17
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 18
(all day)
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
|
11 / 19
End: 12:00
Start: 11/01/2007 - 12:00pm
End: 11/19/2007 - 12:00pm
Chief Scientist: Baptista (Coordination) and others TBD
Goals: This ship time is dedicated to a multi-platform science cruise, involving the R/V Wecoma, at least one glider, and, as needed, the R/V Forerunner; there is also deployment/maintenance time allowed for SATURN station(s). Geographical focus is the CR river-estuary-plume-shelf system. A driver for the cruise is the testing of new capabilities in near-real time data assimilation and observational asset optimization, in support of pre-defined science questions. Unusual for oceanographic cruises, the overall coordination will come from land on a near real-time basis, but detailed logistical decisions will continue to require "on-board" (and perhaps "gliders"?) chief scientists.
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11 / 20
Start: 11:00
End: 12:30
To view the recorded video webcast of this seminar, click here
(username: lecture; no password).
November 20th, 11 am - 12:30 pm
Percy Donaghay
Graduate School of Oceanography, University of Rhode Island
TITLE
High resolution 4-dimensional coherent sampling with autonomous moored profilers.
ABSTRACT
One of the grand challenges in building coastal environmental sensing networks is to develop in situ systems that can provide to the network data on the vertical and horizontal spatial and temporal variability in the physical, biological, and chemical structure of the coastal ocean.
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11 / 21
|
11 / 22
|
11 / 23
|
11 / 24
|
11 / 25
|
11 / 26
|
11 / 27
|
11 / 28
|
11 / 29
Start: 15:00
End: 16:00
James Bellingham
Chief Technologist
Monterey Bay Aquarium Research Institute
Paul Clayton Building - Room 401
OGI School of Science & Engineering
Oregon Health & Science University
Nov 29, 2007 at 3:00pm
Topic:
Reconfiguring Ocean Observation Systems in Real Time
Abstract
Scientific and technical advances are converging to provide the ocean sciences vastly improved flexibility in observing the ocean. Not only is it possible to make many more measurements, but mobile robotic platforms are providing the ability to reconfigure an observation system at will.
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11 / 30
Start: 09:30
End: 11:30
Group discussion on adaptive sampling at CMOP. Antonio will lead the discussion.
Open meeting; Cooley Rm 7212, OGI Campus
Please RSVP if you plan to attend by video (email Ethan Van Matre)
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12 / 1
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12 / 2
|
12 / 3
|
12 / 4
|
12 / 5
Start: 12:00
For West Campus Faculty, Staff, and Students
Fall and Winter Term Schedule, 2007-8
Wednesday, 12/5/07, 403 WCC, 12 noon – 1:00 pm:
Strategies for Shortening the Text in a Grant Proposal and Other Documents
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12 / 6
|
12 / 7
|
12 / 8
|
12 / 9
|
12 / 10
|
12 / 11
Start: 11:00
End: 12:30
Paul Clayton Building—Room 401
Terrestrial organic carbon in the sea: A multi-proxy investigation
 Anitra Ingalls at sea
Anitra Ingalls, University Washington School of Oceanography
ABSTRACT: Near shore sediments are the largest long-term repository of organic carbon in the ocean. Organic carbon originally produced on land and later delivered to coastal sediments via rivers and runoff comprises a significant portion of this important carbon reservoir.
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12 / 12
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12 / 13
Start: 15:00
End: 16:00
.gen { font-family: Verdana; font-size: 11px;}
.h1 { font-family: Verdana; font-size: 12px; color:#000066;}
LOCATION—PC 401 (Note: Time and date updated!)
Application of in-situ chemical sensors for studies in the Delaware Bay and the hydrothermal vents of Yellowstone and the deep Pacific
George Luther driving the deep-sea submersible Alvin
Read more about Dr. Luther
Paul Clayton Room 401
OGI School of Science & Engineering
Oregon Health & Science University (West Campus)
20000 Walker Road
Beaverton, OR 97006
The seminar is also available by two-way videoconference and webcast. (Username: lecture; no password).
|
12 / 14
Start: 09:00
LOCATION—Cooley Rm 7212 (OHSU/OGI Campus)
Simultaneously by video conference
CMOP research cruise planning meeting
December 14, 2007. 9 am PST/ 12 noon EST
Proposed cruise dates:
5-April to 23-April
10-July to 23-July
18-Sept to 6-Oct
Wecoma cruise schedule
Agenda for meeting
1. Introductions (5 min)
2. Review 2007 research cruises (Crump, ~10 min).
3. Brief discussion of findings (Anyone, 15-30 min).
4. Discuss goals for 2008 research cruises.
5. Discuss cruise dates and possible changes.
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12 / 15
|
12 / 16
|
12 / 17
Start: 18:30
End: 20:00
6:30-8:00pm
LOCATION:—Wilson Clark Center (Building 3), 2nd floor balcony
OHSU West Campus
OHSU/OGI School of Science and Engineering
20000 NW Walker Road, Beaverton, OR 97006
campus map
Dinner, with guest speakers (Lesley Hallick, OHSU Provost; Roy Sampsel, EAB Chair)
Attendance: EAB, SMT, OHSU Provost
|
12 / 18
Start: 08:30
End: 17:30
Tuesday, December 18 (8:30 a.m. - 4:30 p.m.
LOCATION—Paul Clayton (Bldg 2), Room 401.
OHSU West Campus
OHSU/OGI School of Science and Engineering
20000 NW Walker Road
Beaverton, OR 97006
Click here for campus map.
NOTE: CMOP offices are in Building 1 on the map, the Cooley Science Center. Enter the building at the center of the "U." Turn left down the hall, go up the stairs, and turn left at the top of the stairs. Antonio's office is the last office on the right, room 7019.
NOTE: TENTATIVE (DRAFT) Agenda
8:30-9:00am
|
12 / 19
|
12 / 20
|
12 / 21
Start: 13:00
End: 15:00
Bill Howe: An Introduction to Python at CMOP.
This meeting is postponed. The talk will be incorporated into a lab session of Antonio's Winter class.
Two hours, split between discussion and hands-on activity.
Potential topics:
-- Basic language features
-- Matlab to numpy transition
-- Plots with matplotlib
-- relational database access
-- Product Factory
|
12 / 22
|
12 / 23
|
12 / 24
|
12 / 25
|
12 / 26
|
12 / 27
|
12 / 28
|
12 / 29
|
12 / 30
|
12 / 31
|
01 / 1
|
01 / 2
|
01 / 3
|
01 / 4
|
01 / 5
|
01 / 6
|
01 / 7
|
01 / 8
Start: 10:30
End: 11:30
For West Campus Faculty, Staff, and Students
Fall and Winter Term Schedule, 2007-8
Tuesday, 1/8/08, 403 WCC, 10:30 am – 11:30 am
Oster's Top 5 Strategies for Writing Concretely and Clearly
|
01 / 9
|
01 / 10
Start: 13:00
End: 14:30
Paul Clayton Bldg, Rm 401
Also available by videoconference
TITLE: Linking observation and modeling for a new understanding of ecological processes
Dr. Percy Donaghay, who is an EBS CMOP Faculty Candidate, will be visiting CMOP Thursday and Friday, January 10 and 11. As part of his visit he will present a seminar, open to the public.
|
01 / 11
|
01 / 12
|
01 / 13
|
01 / 14
Start: 10:00
End: 12:00
Room 7217, Cooley Bldg
Also by video conference.
For those remotely attending our Cruise Planning meeting monday (10 a.m. PST), please call into the bridge meeting room 1004. The address to call is:
vtc.stccmop.org##1004
129.95.72.251##1004
For those whose video endpoints cannot handle meeting room numbers (i.e., extension numbers) we have 2 options.
1) Send your IP address to Ethan evm@stccmop.org, and have him tell the bridge to expect a call from you
2) Have Ethan call you from the bridge
If you want to text your system, please
|
01 / 15
|
01 / 16
Start: 11:00
Room 6217, Cooley Bldg
CMOP cruise data standards meeting
Wednesday Jan 16, 11:00 am
See
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|
01 / 17
|
01 / 18
Start: 15:00
End: 16:30
Paul Clayton Building—Room 401
Environmental Proteomics
Dr. Robert Morris, University of Washington, School of Oceanography
|
01 / 19
|
